text:
In-Call Status Bar Issue

It seems there's two issues when there's an in-call status bar with a taller height. First, the status bar covers up the presented view controller's top part.
Second, after dismissing the presented modal, the presented view controller isn't being reset correctly. To reproduce, on the demo toggle in-call status bar, present the modal, take the app to background and bring it back. Now the presented view controller's frame is wrong. It's something to do with the transform, but I haven't figured it out yet.. On my own app, the controller's frame is actually going off screen (e.g. too large) after the modal is dismissed

@hamedh There are a mountain of problems caused by the in-call status bar. This seems to be a general problem experience by anyone implementing a custom VC presentation and I've yet to find any general solution that fixes all the problems...yet, somehow, Apple's apps don't suffer from these problems.
I actually don't see the problem you describe as written. For me, when I follow your repro steps, it is the presenting controller's view that is not placed correctly, maybe that's what you meant.
It may help get this fixed if we clearly list the problems, here are the ones I've seen so far:
Problem 1

Launch app
Present modal
Enable in-call status bar (presented VC's view isn't shifted down)
Disable in-call status bar
presenting view controller's view is now too large

Problem 2

Launch app
Enable in-call status bar
Present Modal
Dismiss in-call status bar
presenting VC's view isn't shifted up

For problems 3 & 4:

Add a navigation controller to Main.storyboard
Make the nav controller the initial VC
Make the old initial VC the nav controller's root VC
Add some bar button items so things will be easier to see

Problem 3

Launch app
Present modal
Enable in-call status bar
modal is covered by the status bar

Problem 4 (continued from problem 3)

Launch app
Present modal
Enable in-call status bar
Dismiss the in-call status bar
Dismiss the modal
presenting view controller's view is shifted up and the nav bar is now under the status bar

Hi there folks,
Sorry for the delayed response. I’ve been working on this for a while and getting, um, not that far.
Thanks a lot for the test cases, those help a lot. I’ve mostly figured out how to solve the issue with having view controllers resize when the status bar is presented (pushing a branch for that soon), but I’ve gotten nowhere on the issue of the presenting view controller resizing on resuming from background. I’ve come across this bug in Apple’s own implementation many times, so I’m not sure if its fixable at all.
Posting the code ASAP, will add a link here when I do. Do take a look and let me know if it works, and if you’ve found any solutions to the issue with backgrounding

Alright, so here it is: https://github.com/HarshilShah/DeckTransition/tree/status-bar
The issues with the presenting view have been fixed. Two issues remain:

When the modal is presented while the double-height status bar is visible, and then the status bar returns to normal height, the presented view for some reason leaves a 20px gap below even while reporting the full size for frame and branch.

The presenting view animation when the status bar changes height is extremely janky.

If either of you have the time/know how to fix this, I would appreciate the help. Thanks!

@HarshilShah Thanks for fixing this!
This commit fixes the 20px gap at the bottom (remaining issue number 1): https://github.com/Tundaware/DeckTransition/commit/bdcd27b70a88dd6e6bfcb06562dc614beebb4924

I just pushed another commit to the branch; the frame needs to be changed in advance for the mask change to work in some cases.
Gonna start work on refactoring out constants soon. Just getting the remaining big issues out of the way before updating for iOS 11/Swift 4, and then working on new features

@HarshilShah I found another issue with this after pulling it into my own app. My initial VC is only shown briefly, depending on whether an upgrade task needs to be performed prior to showing my real UI. Once it's time to show the real UI, it performs a "Show Detail/Replace" segue to another VC.
The problem I see with this setup is when the modal has been presented, then the double-height status bar is shown. The presenting VC is shifted down 20px too far, so you don't see it behind the modal. Then, when you dismiss the modal, the VC is still off by 20px, leaving a gap at the top and the bottom off screen by 20px.
I updated the Example app and pushed it to my repo to demonstrate (https://github.com/Tundaware/DeckTransition/tree/status-bar). To clarify:

Launch App
Present Modal
Show double-height status bar (observe that presenting VC is no longer visible)
Dismiss modal (observe that the presenting VC is shifted down, leaving a gap at the top)

Would be great if you folks could try the status-bar branch now. I think I've finally fixed all the issues

I have been running that branch in production for a few weeks now, and it seems there are no issues. Thank you!

Great! Pushed a big update just yesterday, so let me know if that breaks anything.
Also, if you’re the lib in a production app, would be cool if you could PR the apps using section in the ReadMe

#21 is now merged to master

@HarshilShah Sorry, but this still has a problem. The example I previously provided demonstrates the issue.
I've rebased my example against the updated master branch and added a 20px border to make it more obvious:
https://github.com/Tundaware/DeckTransition/tree/status-bar
Repro steps

Wait for 'loading...' vc to be dismissed and main vc to load.
Present the modal
Show the in-call status bar
Dismiss the in-call status bar
Dismiss the modal

This is what you're left with:

Downloaded the project from your link, followed the steps you said, and here's what I'm seeing

@HarshilShah You are correct, I accidentally listed them in the wrong order, sorry about that. I will update the comment.

Here's the thing: I printed the frame of the presentingViewController before the transform (this happens right before dismissal) and after the dismissal's completion: The frame is correctly set to be 20px shorter than full height.
So the resizing is happening outside the context of this library, after the dismissal animation.
I removed the LoadingViewController and instead had the transition happen from ViewController class, and that seems to work perfectly. Issue seems to be with presenting the view controller from the loading screen.

@HarshilShah Thanks for the workaround. That results in an incorrect frame after dismissal, until the large status bar is dismissed, after which it does return to the correct frame.
In addition to this, I see problems during rotation, with both the presenting and the presented view controller frames (even without this workaround applied).
Given all the problems that seem to stem from using this transition from a VC that was presented by way of a 'replace' segue, I think I'm going to try a different a approach for getting my main VC presented that doesn't cause so many problems.
This all feels like bizarre iOS bugs at this point that aren't worth trying to account for in this library.

The frame isn’t incorrect, btw, it’s exactly what you’d get if you triggered the double height status bar on just the presenting VC

Ok, I'll rephrase then:) It looks like the frame is wrong since the top of the presenting view is 20px above the bottom of the double-height status bar when this workaround kicks in.

On Aug 1, 2017, at 10:35 PM, Harshil Shah notifications@github.com wrote:
The frame isn’t incorrect, btw, it’s exactly what you’d get if you triggered the double height status bar on just the presenting VC
—
You are receiving this because you commented.
Reply to this email directly, view it on GitHub, or mute the thread.

Workaround isn’t kicking in or doing do anything here, to be clear. That’s stock UIKit behaviour

I don't think we're on the same page. The workaround does kick in, but it fixes one problem by creating a lesser one. The screenshots below show the presenting VC after the following steps:

Launch
Wait for loading VC to be replaced
Present modal
Show in-call status bar
Dismiss modal

With workaround

Without workaround

A different workaround is rather than adjusting the origin in the dismiss callback, reduce the size. This makes it look right until the double-height status bar is dismissed, after which a 20px gap is left at the top. To fix the gap at the top, you can reset the frame to the view's window bounds the next time the status bar frame is reduced in height. Of course, as you found yourself, none of this is a problem if I don't present a loading VC, then replace it with the main VC (ViewController.swift). So, it may be better for me just to avoid this scenario with a different design.

My point was your screenshot labelled "With workaround" is what you'd get if you follow these steps:

Launch
Wait for loading VC to be replaced
Show in-call status bar

That is how UIKit does it. Showing the 40px status bar doesn't shrink the content by 40px, it only shrinks it by 20px

Ah ok, I understand now. Your workaround does seem to do the trick then:)
What I found in my actual app, which is a bit more complex, was that the view that needed it's origin set to .zero was not actually the presenting VC's view, but the first subview of the furthest ancestor UITransitionView.
-> UIScreen
--> UIWindow
---> UITransitionView
----> UIView - This is the one that needed the origin adjusted
-----> UILayoutContainerView
------> UINavigationTransitionView
-------> UIViewControllerWrapperView
--------> (a few more layers of containers/wrappers/etc)
---------> The presenting VC's view

authors: HarshilShah gcox hamedh

repo: HarshilShah/DeckTransition


text:
🛑 Mojang's Public API is down

In 8452cd8, Mojang's Public API (https://api.mojang.com/) was down:

HTTP code: 429
Response time: 55 ms

Resolved: Mojang's Public API is back up in 7b8e065 after 6 minutes.

source: gharchive/issue

repo: HavenCoreNetwork/havencore-status-page

license: MIT

license_type: permissive

license_source: github-api


text:
Update with latest lua-simdjson changes

This includes the following:

Windows support (https://github.com/FourierTransformer/lua-simdjson/pull/82)
arm64 support (https://github.com/FourierTransformer/lua-simdjson/pull/87)
use of the on demand parser, which should be faster (https://github.com/FourierTransformer/lua-simdjson/pull/83)

I've run the haxe test suite on linux with this updated version and everything seems to work well now.

Hmm, this is the kind of PR that I'd typically "Rebase and merge", but Github tells me "This branch cannot be rebased due to conflicts" if I try that.

It may be best to merge it with a normal merge, that way github will say that it is in sync with the upstream repo. If it is rebased then github will say it is still behind.

source: gharchive/pull-request

repo: HaxeFoundation/hx-lua-simdjson


text:
pdftotree.parse() returns None

Describe the bug
pdftotree.parse() returns None
To Reproduce
1)
successful install on ubuntu 18.4 using:
sudo apt install python3-tk
pip install pdftotree

import pdftotree
pdf_file = 'mypdf.pdf'
output = pdftotree.parse(pdf_file, html_path=None, model_type=None, model_path=None, favor_figures=True, visualize=False)
returns None type in output.
Had the exact same problem in Windows, decide to setup an unbuntu machine to give it a try, same results.  I've tried various .pdf files as well, to no avail.
What should I check for to debug this?
Thank you kindly in advance, -J

Update:  my apologies, I wasn't thorough enough in testing various .pdf documents, as the docs I have are all scanned and OCR'd, as it turns out.
When I tested a .pdf of purely digital origin (grabbed one from pubmed), pdftotree worked as expected.
However, I'd still love to try it on my data.  Any advice would be greatly appreciated.

We currently do not support scanned documents, unfortunately. Though, it is something we'd like to do in the future. We'd recommend trying Adobe or Abby to convert your documents if they are scanned.

authors: jay-reynolds lukehsiao

repo: HazyResearch/pdftotree


text:
Parser is not working

Hello,
I am trying the tutorials and faced this problem. If information is welcome!!!
Best regards,
Nurzat

Hi Nurzat,
I'm not quite sure what's going on from the info you've provided- do you have any other info on what's going on, e.g. error messages in the terminal or anything?
Also I am confused because the image of your notebook seems to show that two cells were both executed at the same time (In [6])... how was the notebook executed?

Hi Alex,
thanks for response. It seems the problem was with configuration, but working in virtual environment solved the problem.

Awesome!  If you have any notes on specific issues / solutions, definitely post them here, either way glad it's resolved

authors: NurzatRakhman ajratner

repo: HazyResearch/snorkel

license_source: bigquery


text:
[spinner] Missing declaration file when using path import

When trying to import a component with path import, typescript shows an error about missing declaration file.
Note: There is no runtime error
RingSpinner

Checking the dist folder, declaration files are generated in a sub-folder:

Declaration files should be in the same folder of its js files.


text:
Add European Cities in hfn-centers

Many cities like London and Paris are missing

Closing it here and moving it to https://github.com/HeartfulnessInstitute/hfn-centers-js


text:
Upgrade to 4.9.0.1 recommendation - re-check delta in java file regarding 4.5.1.13

Modification to do to be more compliant with requirement of ATAK 4.9.0.1
build.gradle : proguard from 7.1.0 to 7.2.2
gradle-warpper.properties : check the feasability of building plugin with gradle in version 7.5.1
re-check java files (MapComponent & DropDownReceiver) to be "more" compliant with 4.5.1.13

Corrected in the commit : https://github.com/Hellikandra/atak-plugin-template/commit/e34ffacb7a39d68c6d43cd4067e8c3eeeba7b74d

repo: Hellikandra/atak-plugin-template


text:
Handle empty responses

Currently it's not possible to await (or .then) a cancel or delete request,
eg. the following will hang indefinitely if the signature request is cancelled
successfully:
await hellosign.signatureRequest.cancel(sigId)

This PR teaches the response handler to deal with this case and resolve/
callback, and to handle any other unexpected cases without hanging.
Successful 'cancel' requests will respond with a success status and no
content. _responseHandler didn't have a path for that, as it wasn't
checking for the case where the content-length header has a value of 0.
I'm not sure which cases will reach this path and have a content-length
of 1, so I've left that behaviour as it is so we don't break anything!
Resolves #77
Resolves #50
Resolves #21

Hi @jacobpgn! We will have your pull request reviewed at our earliest convenience. Thank you so much for your contribution to the Node SDK!

Confirmed that the Content-Length is 0 when you get a successful Status Code of 200 for the endpoints mentioned:

Cancel Incomplete Signature Request
Delete Template

Other endpoints to consider:

Delete Team
Remove Signature Request Access

Note:

Delete API App (Checks for a status code of 204 - The server will successfully process the request, but will not returning any content). Since there is no content, then there is no reason to specify a Content-Type header.

Thank you both for reviewing and shipping a new release! 😄

authors: jacobpgn latoyazamill

repo: HelloFax/hellosign-nodejs-sdk

license: mit


text:
🛑 story is down

In 41fe763, story (https://story.helloyeew.dev/) was down:

HTTP code: 0
Response time: 0 ms

Resolved: story is back up in 69b7f6c after 16 minutes.

repo: HelloYeew/site-uptime-monitor


text:
Two new constraints (dependent on PR #47 of HerbConstraints)

Depends on https://github.com/Herb-AI/HerbConstraints.jl/pull/47 (merged)
This branch adds tests for two new constraints of the solver:

Unique(rule). enforces that a rule can be used at most once in a program tree
ForbiddenSequence(sequence). enforces that a sequence of rules cannot appear in any vertical path in the tree (gaps are allowed).

Resolved merge conflicts, and verified that all tests passed with the following setup:
packages = [
    PackageSpec(name="HerbConstraints", rev="dev"),
    PackageSpec(name="HerbGrammar", rev="dev"),
    PackageSpec(name="HerbCore"),
    PackageSpec(name="HerbInterpret", rev="dev"),
    PackageSpec(name="HerbSearch", rev="forbidden-path"),
    PackageSpec(name="HerbSpecification", rev="dev")
]

authors: ReubenJ Whebon


text:
Qt on Win10 can't use C:\ as INCLUDEPATH

I had to move the C:/cwf directory to C:/cwf/cwf and change the INCLUDEPATH entry for win32 in the pro files to C:/cwf.
I don't know if anybody else can replicate this, but it took a while to find out what was happening so I hope it's a helpful report.

Hello my friend.
I use it on Windows 10 without any problem and we also compile it for each commit automaticly on App Veyor for Windows.
Thank you.

Hmmm.... interesting, thanks. I'm using MinGW 32 bit - are you using MSVC?

authors: HerikLyma paul-reilly

repo: HerikLyma/CPPWebFramework


text:
Enterprise DAO - project logo image broken

https://images2.imgbox.com/c9/73/wADKtP1e_o.png
Can you update this logo please?

The image is working again. I assume that was some downtime from the host.
I'll close this ticket.
cc\ @krys-s21
Here's the image working:

repo: HermesProtocol-io/assets


text:
🛑 RtView2 VinsonCloud is down

In 24b73ec, RtView2 VinsonCloud (http://rtview2.vinsoncloud.com/) was down:

HTTP code: 504
Response time: 10024 ms

Resolved: RtView2 VinsonCloud is back up in a789904.

repo: HernanVinson/upptime


text:
background from 'background" type instead of "features"

with the evolution of the dnd5e module on vtt,
and the dndbeyond importer,
backgrounds can be imported but they use the "background" type.
I would be nice for the hero creation tool to be able to accept input from that new type.

I totally missed this new issue, but it's almost done already.. just behind the scenes! 👀 I need to finish some parts but it should be releasing soon

Just wondering the status on this? I know that it's being worked on - but unfortunately it's holding things up with getting my server up and running (manually importing doesn't work for everything).

backgrounds seem to be already working most of the way, I'm being a little halted by the advancement API so that they are reversible (with the provided Acolyte background, when you drag it into a character sheet, it will add the feature, but also will remove the feature if you remove the Background; that part needs a little wiring that I haven't had time to work on yet)
Worst-case scenario, I aim to deliver something this weekend, even if it's sadly half-baked; which would mean that if you remove a background added through the Creation Tool, it will not remove the feature and/or probably throw an error on the console, but you should be able to then remove the backgrounf feature manually. Same thing with Class Features (they basically rely on the same mechanism that I haven't tackled yet)

authors: Wraithlord2015 ccjmk laresgod

repo: HeroCreationLab/hero-creation-tool


text:
When specifying a path from the 'textures' folder, it does not appear as enchanted.

example
.button(1, "§l§bKIT", [], "textures/items/diamond", 1, true)

Works as intended. The texture paths are static and do not support the enchant glint.


text:
tidy up build system

Remove files generated by autotools and add them in .gitignore, such files should be shipped only in tagged release and not in the master tree.
Add binary and intermediate outpuf files in ignore as well

bj

BTW - This LGTM regardless of the specfile change.

repo: HewlettPackard/netperf


text:
"Scanning failed: Illegal access" - make more aesthetic

The Alert box which pops up when you deny camera access is kind of technical, we should instead give a message to the user that they should Allow if they want to scan points.

The proper messages are actually ready to use but they were going to show as text under the button. I'll fix them, they're in the scan.js.
Thanks for hunting.

Added but yet to test a dialog of error instead of a debugging alert.

repo: HexTree/CoffeePoints


text:
check if image file exists

If you try to embed an image which doesn't exist the email isn't valid and won't be delivered without any error message.
I refactored the code a little bit as the embedImages method got a bit large and hard to read with all the things going on, i hope that's ok with you.

I guess you're right. Probably also makes problems with multiple redirects. Maybe the best is to just ignore redirects and only evaluate the first response.

Ran into some other problems with more testing as the http version could be different as well. with getimagesize it also seems to work with redirects etc. so this to be a good solution.

Viele Danke
I will release a new version with your fix.

repo: Hexanet/swiftmailer-image-embed


text:
Initial Conditions

https://github.com/Hickles02/FYP478/blob/77396aace18d3152b7a4fe47f8b567958ceb13d6/MATLAB/main_system.m#L33-L35
@tmlouw
Marlin specifies the initial molar holdup on each tray as one but says nothing regarding the mole fractions. Do you agree that they should all be 0?

I would rather set them equal to 0.5 initially. Funny things can happen close to zero...


text:
Kanban Project Link

kanban project link ...
Note: We are 2 member in this group:
Author 1:
Haider Ahmad
Author 2:
Habitamu Asimare

Hi Team,
Your project is complete!  There is nothing else to say other than... it's time to merge it :shipit:
Congratulations! 🎉
Highlights

Created the Kanban board that will be used for the JavaScript capstone👏 👏

Cheers and Happy coding!👏👏👏
Feel free to leave any questions or comments in the PR thread if something is not 100% clear.
Please, remember to tag me in your question so I can receive the notification.

As described in the Code reviews limits policy  you have a limited number of reviews per project (check the exact number in your Dashboard). If you think that the code review was not fair, you can request a second opinion using this form.


text:
いいところ診断の結果に”優しさ”を追加する。

～のいいところは優しさです。
を追加。

これから対応します。

commit 77e0314 で対応しました。

repo: Hide-Kohigashi/assessment


text:
Branch Schematic

I'm having trouble loading the branch Schematic in my world when I do it just shows up as 4 stone blocks and a repeater and nothing more but I have no issue loading the regular schematic

We are aware of this problem; however, its cause is still unknown.
This will likely only be solved with the addition of new export options, where the branch schematic option will be rewritten from scratch.

repo: HielkeMinecraft/OpenNoteBlockStudio


text:
Proxy banning

There needs to be a possibility to ban players from the network.

The RPC API will also be expanded to support this of course.

repo: HimbeerserverDE/multiserver


text:
Assignment 2

What changes are you trying to make? (e.g. Adding or removing code, refactoring existing code, adding reports)
Added code to answer questions in assignment-2 on multivariable linear regression.
What did you learn from the changes you have made?
I learned how to inspect and visualize datasets, split a dataset into train and test sets using proportions and run multivariable linear regression on datasets.
Was there another approach you were thinking about making? If so, what approach(es) were you thinking of?
N/A
Were there any challenges? If so, what issue(s) did you face? How did you overcome it?
I went through the course notebooks and followed examples to answer the questions.
How were these changes tested?
I ran all the code to ensure there were no errors and the model ran as expected.
A reference to a related issue in your repository (if applicable)
N/A
Checklist

[X] I can confirm that my changes are working as intended

A2: Complete
Great work

authors: HimeshiS Melokazz


text:
/hoj/testcase目录下的pronlem_xxxx的文件夹是什么时候或者什么机制下回在/judge/test_case目录下生成一份 problem_xxxx的文件夹

批量上传个题目，包含输入输出用例，用户会自动解压到/hoj/testcase目录下。在执行提交测评时会提示"System error"。如图：

按照控制台日志提示，排查到test_case不存在。如图：

在跟踪测试用例执行过程中，发现执行器会在.judge/test_case目录下查找测试用例。上传的测试用例在/hoj/testcase目录下。
请问是缺失哪个流程或者代码没有执行。
服务器没有使用docker部署，使用的是linux本地化部署。

backend服务处理上传数据文件到/hoj/testcase，如果是分布式部署，也就是backend服务与judgeserver服务不在同一机器上，是通过rsync服务定时同步到judgeserver服务的。

如果是单机部署，那么bakcend和judgeserver对应的docker最终挂载的题目数据文件目录是一致的，具体看docker-compose.yml文件的volumes配置

backend服务处理上传数据文件到/hoj/testcase，如果是分布式部署，也就是backend服务与judgeserver服务不在同一机器上，是通过rsync服务定时同步到judgeserver服务的。

3q，以按照这个方案解决。

authors: HimitZH paynepang

repo: HimitZH/HOJ


text:
🛑 LinkerAPI Service is down

In 8fde22d, LinkerAPI Service (https://az-hxg.hexabase.com/linkerapi/health_check) was down:

HTTP code: 0
Response time: 0 ms

Resolved: LinkerAPI Service is back up in e310f0c.

repo: Hokutosei/HexaUptime


text:
V3config support

Added support for V3 config

It seems like I need an explicit review from @peeech in order to merge this.

Peach is PJ but I will admin merge this one as it's not particularly important and being deprecated.

repo: Holo-Host/net-stats-daemon


text:
LethalLevelLoader 1.2.0 Expermental Releases (v50) Will be incompatible with LE

According to the latest test version announcement from LLL（LethalLevelLoader）, due to the sustainable development of LE, future updates will not be compatible with subsequent versions of LE. Will future LE updates consider compatibility with LLL?

Today, I tested the LE preview version with a friend and found the following issues: Firstly, the iron bridge and street lamp base on Kast planet in the LE preview version appear purple, and the main entrance is also the same. I don't know if it's due to the LE preview version itself or the map mod that hasn't adapted to the LE preview version yet; 2、 In thunderstorm conditions, when entering an external map that relies on LE, lightning strikes will occur on the items inside the building

i didn't done the V50 update
i don't longer work on LE
LE was already incompatible with LLL since two months
I don't really plan to continue the mod i'm sorry

Okay, I just feel a bit regretful about this LE module because many high-quality external map mods used to be based on LE, but now they may have to become outdated

repo: HolographicWings/LethalExpansion


text:
[Mod recommend]  Increased Camera Sensitivity by TallgeeseIV

I've been using this mod, it is recommended to use it together with yuzu's "stick range" and "DeadZone" settings.
Mod description
Three different presets are provided to increase the default game options for Camera Sensitivity (Player Camera Speed).

https://gamebanana.com/mods/443927

I'll have to ask to the modded for that

authors: HolographicWings LakeishaKowalczyk

repo: HolographicWings/TOTK-Mods-collection


text:
dev-cmd/bottle: don't take uniq of arguments

[x] Have you followed the guidelines in our Contributing document?
[x] Have you checked to ensure there aren't other open Pull Requests for the same change?
[x] Have you added an explanation of what your changes do and why you'd like us to include them?
[ ] Have you written new tests for your changes? Here's an example.
[x] Have you successfully run brew style with your changes locally?
[x] Have you successfully run brew typecheck with your changes locally?
[x] Have you successfully run brew tests with your changes locally?

If we pass multiple bottles from different OS versions, don't only deal with one of them. We want to read all bottles and produce a JSON for each one.

Good catch @Bo98!

repo: Homebrew/brew


text:
blacklist - remove clojure

[x] Have you followed the guidelines in our Contributing document?
[x] Have you checked to ensure there aren't other open Pull Requests for the same change?
[x] Have you added an explanation of what your changes do and why you'd like us to include them?
[x] Have you written new tests for your changes? Here's an example.
[x] Have you successfully run brew tests with your changes locally?

Currently there is a blacklist entry for "clojure" (the language) that points you towards installing "leiningen" instead, which is the most popular Clojure build tool and the easiest path to a Clojure REPL, so this made good sense until now.
However, the next release of Clojure (1.9.0) will include a Clojure REPL tool (called clj). I am a member of the Clojure core team and I have a separate PR ready to submit with a formula for clojure that includes this tool, but the blacklist entry needs to be removed before that formula can be added.
This patch removes the blacklist for clojure and the test checking the blacklist for clojure.

See https://github.com/Homebrew/homebrew-core/pull/17151 for the new clojure formula PR

Seems reasonable! Thanks for your first contribution to Homebrew, @puredanger! Without people like you submitting PRs we couldn't run this project. You rock!

Thanks!

authors: MikeMcQuaid puredanger


text:
unzip: Ubuntu patchset, ZIP64 and symlink support

Use Ubuntu patchset for unzip, with lots of bug and security fixes.
Enable large file support / ZIP64 for >=4GB and >=64k files.
Enable symlink support.
Compile against system libbz2 instead of built-in.

@DomT4 I figured out the compile problem it was related to some missing headers.
The formula looks much cleaner now, thanks for the feedback.

@DomT4 Somehow the jenkins build seems stuck, the yosemite job is referencing build 280 instead of build 281.

Seems okay?

Yeah, seems fine now, not sure why it stalled so long on the yosemite build.

I pushed a new version that uses the patch archive and apply solution suggested by @ilovezfs above. I also dropped the SYMLINKS define, because it was enabled anyways.

Merged in https://github.com/Homebrew/homebrew-dupes/commit/faeb12a2f67d9edd82bdebad11f8383c5f217594. Thank you for your contribution to Homebrew @felixbuenemann; we appreciate it! :smiley_cat:

Yeah thank you for this @felixbuenemann. Despite the unorthodox upstream situation, I'm happy with how it turned out since it patches CVEs that affect Apple's version, too.

authors: DomT4 felixbuenemann ilovezfs

repo: Homebrew/homebrew-dupes


text:
possible python error at "Correcting umis" step

Hello, I have data from TotalSeqA. I received FASTQ files that were obtained with cellranger mkfastq, and concatenated all the R1 and R2 files into one to run Cite-seq-Count:
cat ADT1_S1_L00*_R1_001.fastq.gz HTO1_S1_L00*_R1_001.fastq.gz > ADT_HTO_1_S1_R1_001.fastq.gz
cat ADT1_S1_L00*_R2_001.fastq.gz HTO1_S1_L00*_R2_001.fastq.gz > ADT_HTO_1_S1_R2_001.fastq.gz

As you can see, I have ADTs and HTOs separated, and 2 lanes per sample.
I installed CITE-seq-Count within a conda environment using pip-install, using
conda config --set pip_interop_enabled True
pip install CITE-seq-Count==1.4.3

I get the error at the "Correcting umis" step (see attached log file). The error message is not very specific, so I don't really know how to troubleshoot. Can you help me out? Attached is also the tags.csv (I loaded a .txt, but i ran the .csv)
tags.txt
cite-seq-count.log
Versions:
conda version : 4.7.12
python version : 3.7.4.final.0
Linux/4.4.0-127-generic ubuntu/16.04.6 glibc/2.23

Hello @sorjuela,
this is kind of concerning as I remember fixing this bug a while ago.
I don't have much time to work on it these days so it might take a while to figure out what's happening as it's also the first time I see it creep up.
Just to be sure, could you run CITE-seq-Count --version for me please.

Hi @Hoohm, yes output is CITE-seq-Count v1.4.3

Hello, I have exactly the same error.
I get the error after "Correcting umis" :
File "/sandbox/users/egaschet/miniconda3/envs/mynewenv/lib/python3.8/site-packages/cite_seq_count/processing.py", line 229, in correct_umis
for TAG in final_results[cell_barcode]:
RuntimeError: dictionary keys changed during iteration
@sorjuela did you find out what the problem was ?

nope, was hoping the author would give me some suggestions/alternatives on how to continue. I'm not using CITE-seq-Count for the moment.

Hello @sorjuela and @EnoraBioinfo I'm sorry for the long waiting time. I'm swamped and only working on CITE-seq-Count on the weekends when I don't have other projects to do.
I want to try and debug this.
Do you have any duplicated tags in your tags.csv files?

Hi @Hoohm, no worries. I don't see any duplicates in mine. You can find my tags file in my first comment above.

I don't see any duplicated tags either :
TGTCTTTCCTGCCAG,antihuman_H7
CTCCTCTGCAATTAC,antihuman_H8
TAACGACCAGCCATA,antihuman_H12
AAATCTCTCAGGCTC,antihuman_H13
CTGTATGTCCGATTG,antihuman_H14
TAAGATTCAGAGCGA,antihuman_H15

I'm having a hard time recreating the error.
Would it be possible to send me some data?

Best case scenario would a small subset that still crashes. You can use the -n option to try it out.

Do you guys provide a whitelist when you run CSC?

Hi @Hoohm sorry for the delay. I can send you some data privately, i will send it to your gmail if that works for you. About the whitelist I'm not providing it, I thought the tags.csv would be enough?

also, I uploaded the log file in my first comment, so you can see how I'm running the software.

@sorjuela by email would be perfect yes.
I was asking about the whitelist because I was suspecting some issues with missing barcodes that would be added and could be responsible for the bug.
As you mentioned, the call is in the log and since you did not provide a whitelist, this is not the problem.
If you send the data, I can run and debug it very easily. That would be amazing.

Ok, I sent you a link to download the files.

Hi all,
have you by chance already found a solution for this? Unfortunately, I stumbled across the same error as mentioned above. Any advice on how to handle this would be great!

Hello @ligrob
This is an old bug. We fixed it by using the latest release, 1.4.3.

Yeah unfortunately I'm also still getting this problem even when running 1.4.3 :(
log-events-viewer-result.txt

Are you using this locally on a clean install?
If you are, would it be possible to send me a sample on which it crashes so that I can try it as well?

@Hoohm what is your email so I can send a reproducible example? I am having the same issue running version=1.4.3. I am currently running with --no_umi_correction to see if that prevents the issue, but that solution is less than ideal. Thanks!

@codymowery check out https://github.com/Hoohm/CITE-seq-Count/issues/125
try running with python 3.7

Looks like that did the trick. Thanks @robinfchan!

@robinfchan  Thanks Robinchan, py37 is working but py38 will produce the bug.

It should be fixed in 1.4.4 that just came out

authors: EnoraBioinfo Hoohm christ-lili codymowery ligrob robinfchan sorjuela

repo: Hoohm/CITE-seq-Count


text:
Typeahead should have an isEditable prop

🐛 Bug Report
The typeahead component has no way of being set to disabled.
Expected behavior
There should be an isEditable prop that controls whether or not the typeahead is editable.
Technical Notes
https://www.npmjs.com/package/react-bootstrap-typeahead
Related Issues
#204
https://github.com/HospitalRun/hospitalrun/issues/218

I can take this.

authors: MatthewDorner jackcmeyer

repo: HospitalRun/components


text:
Text without percentage

In some cases, we may need to show progress text without percentage.
Example if we are showing time related progress, we need an option to remove the percentage in text.
Also we need option to add custom text along with the progress text.

Thank you very much for your advice, later I will add up to him  @sasikumar

Sent a pull request #9  with this issue resolved :+1:

authors: HotBitmapGG sasikumar skynetlabz

repo: HotBitmapGG/RingProgressBar


text:
用了java8吗（as2.1.2  还要怎么配置 或者说哪个个分支212可以用啊）？

Error:com.android.jack.frontend.FrontendCompilationException: Failed to compile
at com.android.jack.Jack.buildSession(Jack.java:978)
at com.android.jack.Jack.run(Jack.java:496)
at com.android.jack.api.v01.impl.Api01ConfigImpl$Api01CompilationTaskImpl.run(Api01ConfigImpl.java:102)
... 85 more
:app:transformJackWithJackForDebug FAILED
Error:Execution failed for task ':app:transformJackWithJackForDebug'.

com.android.build.api.transform.TransformException: com.android.jack.api.v01.CompilationException: Failed to compile

@jiangyongandy 如果你还是2.1.2的话，把        jackOptions {             enabled true         }去掉，然后在app目录下的build.gradle文件里添加classpath 'me.tatarka:gradle-retrolambda:3.2.5'，apply plugin: 'me.tatarka.retrolambda',在编译试一下

`buildscript {
repositories {
mavenCentral()
maven { url "https://jitpack.io" }
}
dependencies {
classpath 'me.tatarka:gradle-retrolambda:3.2.5'
}
}
apply plugin: 'com.android.application'
apply plugin: 'me.tatarka.retrolambda''`
@jiangyongandy

@HotBitmapGG  ok,thanks.

Error:Execution failed for task ':app:transformJackWithJackForDebug'.

com.android.sched.scheduler.RunnerProcessException: Error during 'JayceInLibraryWriterAll' runner on 'static final class rx.internal.operators.OperatorMerge$MergeSubscriber (OperatorMerge.java:0-0)': GC overhead limit exceeded
编译报这种错误怎么处理？

authors: HotBitmapGG jiangyongandy scyanghe

repo: HotBitmapGG/bilibili-android-client

license: WTFPL


text:
undefined method `delete_cookie_on_logout=' for Devise:Module (NoMethodError)

i am getting the following error when i added the config values in the devise
undefined method delete_cookie_on_logout=' for Devise:Module (NoMethodError)`. Can you please help me on this?

Is there any update on this? I'm using Rails with mongoid.

The currently released gem, 2.0.1, doesn't have that rather new feature.
Fetching the gem from github got me over this hump

2.1.0 includes this feature and it was released 2 days ago.

Thanks for the correction. Guess I was a couple days behind, didn’t check before commenting.
Life moves pretty fast.


text:
功能需求

可以添加一个发送文件名就发送对应图片的功能嘛？
或者是 文件名_xxx
发送 文件名
就随机在 文件名_xxx 里抽一个发送

你所说的发送文件名是指发送图片的名字是吗？不过插件会统一修改所有图片的文件名。可以考虑在指令中加入序号，通过序号发送对应图片。

repo: HuParry/nonebot-plugin-randpic


text:
Drop.js + FastClick

Hi, i'm trying to use Drop.js + FastClick on a button with <b>tag within it.
It seems FastClick (?) is causing a double-click somehow in Safari on iOS8.
Anyone know how to work with Fastclick + Drop.js?

Hmm, I've personally hadn't look at FastClick before so I can't answer off the top of my head. Would you happen to have an example project that uses FastClick and Drop that I could possible run locally and test?

Seems like this is related to https://github.com/HubSpot/drop/issues/116, so closing in favor of continuing discussion there.

authors: geekjuice sjelfull

repo: HubSpot/drop


text:
com.google.inject.OutOfScopeException on inject javax.servlet.http.HttpServletRequest

I updated to dropwizard-guice 1.0.0
Since then I do get an com.google.inject.OutOfScopeException when I try to inject the HttpServletRequest:
This is the method signature:
public Response uploadCsvFile(@PathParam("subject_id") String subjectId, @Context HttpServletRequest request)
This is my stacktrace:
WARN  [2016-08-30 12:57:27,713] [X-PEX-CORRELATION-ID:] org.glassfish.jersey.internal.Errors: The following warnings have been detected: WARNING: Unknown HK2 failure detected:
MultiException stack 1 of 1
com.google.inject.ProvisionException: Unable to provision, see the following errors:

1) Error in custom provider, com.google.inject.OutOfScopeException: Cannot access scoped [javax.servlet.http.HttpServletRequest]. Either we are not currently inside an HTTP Servlet request, or you may have forgotten to apply com.google.inject.servlet.GuiceFilter as a servlet filter for this request.
  at com.google.inject.servlet.InternalServletModule.provideHttpServletRequest(InternalServletModule.java:106) (via modules: com.google.inject.servlet.ServletModule -> com.google.inject.servlet.InternalServletModule)
  while locating javax.servlet.http.HttpServletRequest

1 error
    at com.google.inject.internal.InjectorImpl$2.get(InjectorImpl.java:1025)
    at com.squarespace.jersey2.guice.GuiceBindingDescriptor.create(GuiceBindingDescriptor.java:66)
    at org.jvnet.hk2.internal.SystemDescriptor.create(SystemDescriptor.java:463)
    at com.squarespace.jersey2.guice.GuiceScopeContext.findOrCreate(GuiceScopeContext.java:36)
    at org.jvnet.hk2.internal.Utilities.createService(Utilities.java:2022)
    at org.jvnet.hk2.internal.ServiceHandleImpl.getService(ServiceHandleImpl.java:114)
    at org.jvnet.hk2.internal.ServiceHandleImpl.getService(ServiceHandleImpl.java:88)
    at org.glassfish.jersey.internal.inject.ContextInjectionResolver.resolve(ContextInjectionResolver.java:126)
    at org.glassfish.jersey.server.internal.inject.DelegatedInjectionValueFactoryProvider$1.provide(DelegatedInjectionValueFactoryProvider.java:107)
    at org.glassfish.jersey.server.spi.internal.ParamValueFactoryWithSource.provide(ParamValueFactoryWithSource.java:71)
    at org.glassfish.jersey.server.spi.internal.ParameterValueHelper.getParameterValues(ParameterValueHelper.java:90)
    at org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$AbstractMethodParamInvoker.getParamValues(JavaResourceMethodDispatcherProvider.java:127)
    at org.glassfish.jersey.server.model.internal.JavaResourceMethodDispatcherProvider$ResponseOutInvoker.doDispatch(JavaResourceMethodDispatcherProvider.java:160)
    at org.glassfish.jersey.server.model.internal.AbstractJavaResourceMethodDispatcher.dispatch(AbstractJavaResourceMethodDispatcher.java:99)
    at org.glassfish.jersey.server.model.ResourceMethodInvoker.invoke(ResourceMethodInvoker.java:389)
    at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:347)
    at org.glassfish.jersey.server.model.ResourceMethodInvoker.apply(ResourceMethodInvoker.java:102)
    at org.glassfish.jersey.server.ServerRuntime$2.run(ServerRuntime.java:326)
    at org.glassfish.jersey.internal.Errors$1.call(Errors.java:271)
    at org.glassfish.jersey.internal.Errors$1.call(Errors.java:267)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:315)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:297)
    at org.glassfish.jersey.internal.Errors.process(Errors.java:267)
    at org.glassfish.jersey.process.internal.RequestScope.runInScope(RequestScope.java:317)
    at org.glassfish.jersey.server.ServerRuntime.process(ServerRuntime.java:305)
    at org.glassfish.jersey.server.ApplicationHandler.handle(ApplicationHandler.java:1154)
    at org.glassfish.jersey.servlet.WebComponent.serviceImpl(WebComponent.java:473)
    at org.glassfish.jersey.servlet.WebComponent.service(WebComponent.java:427)
    at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:388)
    at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:341)
    at org.glassfish.jersey.servlet.ServletContainer.service(ServletContainer.java:228)
    at io.dropwizard.jetty.NonblockingServletHolder.handle(NonblockingServletHolder.java:49)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1689)
    at io.dropwizard.servlets.ThreadNameFilter.doFilter(ThreadNameFilter.java:34)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1676)
    at io.dropwizard.jersey.filter.AllowedMethodsFilter.handle(AllowedMethodsFilter.java:50)
    at io.dropwizard.jersey.filter.AllowedMethodsFilter.doFilter(AllowedMethodsFilter.java:44)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1676)
    at com.signavio.pex.common.util.PexCorrelationIdFilter.doFilter(PexCorrelationIdFilter.java:32)
    at org.eclipse.jetty.servlet.ServletHandler$CachedChain.doFilter(ServletHandler.java:1676)
    at org.eclipse.jetty.servlet.ServletHandler.doHandle(ServletHandler.java:581)
    at org.eclipse.jetty.server.handler.ContextHandler.doHandle(ContextHandler.java:1174)
    at org.eclipse.jetty.servlet.ServletHandler.doScope(ServletHandler.java:511)
    at org.eclipse.jetty.server.handler.ContextHandler.doScope(ContextHandler.java:1106)
    at org.eclipse.jetty.server.handler.ScopedHandler.handle(ScopedHandler.java:141)
    at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:134)
    at com.codahale.metrics.jetty9.InstrumentedHandler.handle(InstrumentedHandler.java:240)
    at io.dropwizard.jetty.RoutingHandler.handle(RoutingHandler.java:51)
    at org.eclipse.jetty.server.handler.gzip.GzipHandler.handle(GzipHandler.java:396)
    at io.dropwizard.jetty.BiDiGzipHandler.handle(BiDiGzipHandler.java:68)
    at org.eclipse.jetty.server.handler.RequestLogHandler.handle(RequestLogHandler.java:56)
    at org.eclipse.jetty.server.handler.StatisticsHandler.handle(StatisticsHandler.java:169)
    at org.eclipse.jetty.server.handler.HandlerWrapper.handle(HandlerWrapper.java:134)
    at org.eclipse.jetty.server.Server.handle(Server.java:524)
    at org.eclipse.jetty.server.HttpChannel.handle(HttpChannel.java:319)
    at org.eclipse.jetty.server.HttpConnection.onFillable(HttpConnection.java:253)
    at org.eclipse.jetty.io.AbstractConnection$ReadCallback.succeeded(AbstractConnection.java:273)
    at org.eclipse.jetty.io.FillInterest.fillable(FillInterest.java:95)
    at org.eclipse.jetty.io.SelectChannelEndPoint$2.run(SelectChannelEndPoint.java:93)
    at org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.executeProduceConsume(ExecuteProduceConsume.java:303)
    at org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.produceConsume(ExecuteProduceConsume.java:148)
    at org.eclipse.jetty.util.thread.strategy.ExecuteProduceConsume.run(ExecuteProduceConsume.java:136)
    at org.eclipse.jetty.util.thread.QueuedThreadPool.runJob(QueuedThreadPool.java:671)
    at org.eclipse.jetty.util.thread.QueuedThreadPool$2.run(QueuedThreadPool.java:589)
    at java.lang.Thread.run(Thread.java:745)
Caused by: com.google.inject.OutOfScopeException: Cannot access scoped [javax.servlet.http.HttpServletRequest]. Either we are not currently inside an HTTP Servlet request, or you may have forgotten to apply com.google.inject.servlet.GuiceFilter as a servlet filter for this request.
    at com.google.inject.servlet.GuiceFilter.getContext(GuiceFilter.java:165)
    at com.google.inject.servlet.GuiceFilter.getOriginalRequest(GuiceFilter.java:147)
    at com.google.inject.servlet.ServletScopes$1$1.get(ServletScopes.java:107)
    at com.google.inject.internal.InternalFactoryToProviderAdapter.get(InternalFactoryToProviderAdapter.java:41)
    at com.google.inject.internal.InjectorImpl$2$1.call(InjectorImpl.java:1016)
    at com.google.inject.internal.InjectorImpl.callInContext(InjectorImpl.java:1092)
    at com.google.inject.internal.InjectorImpl$2.get(InjectorImpl.java:1012)
    ... 64 more

Any idea what might be wrong here?
Thanks

Hmm I'll take a look. Out of curiosity, does it work if you inject a Provider<HttpServletRequest> into your constructor and then call requestProvider.get() inside of your uploadCsvFile method?

Thanks for the advice, but unluckily I do still get the same exception.

I ran into this as well.
It looks like the issue is caused by JerseyUtil.registerGuiceFilter, specifically:
environment.getApplicationContext().getContextPath() + "*"

Servlet and filter mappings don't need to take the server context path into account, "/*" should be sufficient.
The bug goes away when I unset my application context path, and works if I manually add the filter to match all.
Will push a patch momentarily

I came here to suggest exactly what @cakofony did. The io.dropwizard.jersey.setup.JerseyServletContainer is being mapped to /* so it makes sense to map the GuiceFilter to the same.

In the meantime this can be worked around by adding:
environment.servlets()
    .addFilter("Guice Filter", GuiceFilter.class)
    .addMappingForUrlPatterns(null, false, "/*");

I had this problem even with 1.0.0.1. The culprit was the Session injection:
public Settings getSettings(@Session HttpSession session) { ... }
I could solve it by changing it to:
public Settings getSettings(@Context HttpServletRequest req) { HttpSession session = req.getSession(); ... }

I am also getting the same error. Adding the below didn't help.
environment.servlets()
.addFilter("Guice Filter", GuiceFilter.class)
.addMappingForUrlPatterns(null, false, "/*");
Using DW version 1.0.6 and dw-guice version 1.0.0.3

I was injecting http request into method parameter which is failing. When i moved the same to constructor it worked fine.
Not working - public void someMethod(@Context HttpServletRequest request ...
Working - public SomeConstructor(@Context HttpServletRequest servletRequest){...

Injecting a provider for HttpServletRequest worked for me in DW 1.1.0 and dw-guice  1.0.6.0

Replacing HttpServletRequest with Provider worked for me with dw 1.2.1 and dw-guice 1.0.6.0.

We occasionally get this exception in our service when injecting a com.google.inject.Provider<HttpServletRequest> requestProvider into an exception mapper for our service. We have not been able to reproduce this issue locally by replaying the same requests but sometimes see the above exception in our service logs.

authors: cakofony gauravic08 heldeen jcolaco-nmz jhaber mattcoley priyadarsh ra2085 svenwb

repo: HubSpot/dropwizard-guice


text:
Also update the variable name in the picture example

Update example variable name to match description of array, as per https://github.com/HubSpot/humanize/pull/72

Thanks for this. It looks like this example was completely overhauled in https://github.com/HubSpot/humanize/pull/101

authors: DZittersteyn also

repo: HubSpot/humanize


text:
Segmentation fault (core dumped) when executing "train_ModelNet40.py"

Hi, @HuguesTHOMAS ,
When I execute python train_ModelNet40.py, I got the Segmentation fault error as the following:
Data Preparation
****************

Loading training points subsampled at 0.020
1620.2 MB loaded in 367.4s

Loading test points subsampled at 0.020

411.6 MB loaded in 40.1s

Starting Calibration (use verbose=True for more details)
Segmentation fault (core dumped)
(pytorch1.4) root@milton-ThinkCentre-M93p:/data/code10/KPConv-PyTorch#

Any hints to solve this issue?
THX!

Hi @amiltonwong,
Mmmh, I would guess it has something to do with the cpp wrappers, maybe the was a problem when you compiled them? I you set the num_workers to 0, then you'll be able to track down where the segmentation fault happens in the python code, and see if it is one of the cpp wrappers.

authors: HuguesTHOMAS amiltonwong

repo: HuguesTHOMAS/KPConv-PyTorch


text:
otherContributions embedded?

I would like to suggest to make the "otherContributors" an embedded type instead. This is because:

A contribution can not exist without its product
The "https://openminds.ebrains.eu/core/Contribution" is a minimal schema (very few properties) and therefore well suited for being embedded

https://github.com/HumanBrainProject/openMINDS_core/blob/802161ff8ac0ece09487a090ffb1dc15fc617a9f/schemas/products/researchProductVersion.schema.tpl.json#L114

This is then an embedded schema with links to not embedded schemas, correct? But in principle, quantitativeValue is this as well (linking to controlledTerm/UnitOfMeasurement).
@olinux it makes sense to me. Should I do the PR? Or should I make the commit in PR #168?

@olinux this request is now integrated as commit to PR #168

This issue was solved in PR #168

authors: lzehl olinux


text:
Implement basic GET endpoint

GET endpoint checks DyanmoDB for CompletedReducerExecutions to determine if result is ready. If ready, return 200 and the S3 prefix key pointing to where the request results are. If not ready, also return 200(?) with appropriate messaging.

Thanks for the comments @brianraymor - I agree we can just go with one and my vote is for the 303 with location header. I've reached out to @hannes-ucsc @NoopDog for input on the API response changes. I don't have an issue with removing links in v0 - @mckinsel ?

repo: HumanCellAtlas/matrix-service


text:
Cannot use newer Versions of jsonschema at Backend.

Hi Team,
currently, I am implementing Outlines in the Backend's model for Predictions.
Unfortunately, Outlines requires the latest Version of jsonschema e.g. 4.x.x but label-studio (version 1.13.0) needs exact the version 3.2.0 from jsonschema.
Do you have any tip?
Thank you for your support!

Hi @lanluu, this will be addressed on develop soon: https://github.com/HumanSignal/label-studio-sdk/pull/271/files#diff-50c86b7ed8ac2cf95bd48334961bf0530cdc77b5a56f852c5c61b89d735fd711
Unfortunately this upgrade most likely won't make it into our upcoming 1.13.1 release, but it'll be in the next one.

This version of jsonschema conflicts with requirements from jupyter.  So, one cannot currently simultaneously have an installation of label-studio and recent jupyter.

authors: csbrown jombooth lanluu

repo: HumanSignal/label-studio


text:
Connection Failed

Connection Failed:
Error message: PKey::parse_pem: error in private key:: error:1C80064:Provider routines::bad decrypt / error:11800074:PKCS12 routines::pcks12 cipherfinal error ; error: 1C800064: Provider routines:: bad decrypt / error: 11800074:PKCS12 routines::pkcs12 cipherfinal error
When trying running VPN_Client

Resolution:
The Arquivo.ovpn file was misconfigured, containing information from other users.


text:
Decrease LP3 skew band

We want to decrease the skew band and make sure that we are still passing tests

closed with #37


text:
버킷리스트 페이지 추가하기

⌛ Issue
버킷리스트 페이지 추가하기
🚀 To-do

버킷리스트 페이지 만들기
HeaderList 수정하기
router 설정하기
데이터 불러오는 훅 만들기(swr 활용해보기)
카테고리별로 색 다르게 만들기
버킷리스트 추가하는 모달 만들기
삭제, 수정 기능 만들기

불필요한 페이지라고 판단해서, 페이지 삭제함.

repo: Hyejinijini/my-react-blog


text:
Fix bug where findGitRepo always returns null

The Query annnotation has incorrect parameter (options.repoUrl) due to which findGitRepo method always returns null.
The correct parameter is options.url as seen in the value of com.capitalone.dashboard.model.GitRepo class' REPO_URL constant.

Affects: <bitbucket-collector-version-number>.

Individual Agreement
Corporate Agreement

[x] I Have signed the CLA

 Thank you for your submission! We really appreciate it. Like many open source projects, we ask that you sign our Contributor License Agreement before we can accept your contribution.You have signed the CLA already but the status is still pending? Let us recheck it.

@iamchetan I didnt not find unit tests for this change, can you confirm if this has been tested if so can up date the PR detail with the version where this change has been tested against

@iamchetan can you provide the evidence of testing so that this change can be accepted

@shishirchaturvedi can you validate this change?

@rvema This change LGTM. The url parameter is correct as it can be verified from com.capitalone.dashboard.model.GitRepo.
However, this method is not used in this repository(at least I didn't find its usage) - com.capitalone.dashboard.repository.GitRepoRepository#findGitRepo.

Thanks for your help

authors: claassistantio iamchetan rvema shishirchaturvedi

repo: Hygieia/hygieia-scm-bitbucket-collector


text:
TypeError: cannot unpack non-iterable NoneType object

配置完后执行main.py报错
TypeError: cannot unpack non-iterable NoneType object

麻烦提供下详细报错

C:\Program Files\Tools\Nessus_Report\NessusToReport-1.2>python3 main.py
2024-05-22 14:44:55,905 - root - INFO - 开始初始化数据
2024-05-22 14:44:55,905 - root - INFO - ---开始读取数据
2024-05-22 14:44:55,938 - root - INFO - ----漏洞种类总数：23
2024-05-22 14:44:55,938 - root - INFO - ----漏洞主机总数：4
2024-05-22 14:44:55,938 - root - INFO - ---开始翻译数据
2024-05-22 14:44:55,938 - root - INFO - ------翻译漏洞总数：1
0, message='', url=URL('https://www.tenablecloud.cn/plugins/nessus/192042')
Traceback (most recent call last):
File "C:\Program Files\Tools\Nessus_Report\NessusToReport-1.2\main.py", line 48, in
h = Handle(args.docxtype, args.exceltype)
^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
File "C:\Program Files\Tools\Nessus_Report\NessusToReport-1.2\modle\handle.py", line 65, in init
func_translate_toolstranslate_tool.run()
File "C:\Program Files\Tools\Nessus_Report\NessusToReport-1.2\modle\common\translate\base.py", line 110, in run
for plugin_id, resinfo in cn_resinfos:
^^^^^^^^^^^^^^^^^^
TypeError: cannot unpack non-iterable NoneType object
C:\Program Files\Tools\Nessus_Report\NessusToReport-1.2>

authors: Hypdncy Vumei liyikrad

repo: Hypdncy/NessusToReport


text:
国密改造当下任务列表/Tasks for Modular-crypto-service

我们欢迎您以中文或英文任何形式作出任何形式的贡献。如果需要，我们会协助翻译。
We are welcome for any kind of contribution as code/comments/etc... if needed, we will do translate between Chinese and English.

[x] sm3 hash改造/bug fix(https://github.com/Hyperledger-TWGC/fabric/pull/18)
[x] 单元测试/unit test(https://github.com/Hyperledger-TWGC/fabric/pull/18)
[x] msp和bccsp适配改造调研(这里主要是引入国密option)/ msp and bccsp refactor with option investigation(https://github.com/Hyperledger-TWGC/fabric-rfcs/pull/4)
[ ] msp和bccsp适配改造(这里主要是引入国密option)/ msp and bccsp refactor with option
[ ] 插件模式改造 / make code pluggable
[ ] e2e测试 / e2e testing
[ ] cryptogen改造 / cryptogen support
[ ] 联系国际社区，进行项目讨论和推动/维护twgc的fork / push rfc discussion
[ ] https://github.com/hyperledger/fabric-rfcs/pull/34#discussion_r739647075 sdk相关尝试和讨论/sdk related things check

欢迎大家积极贡献。/ Welcome for any kind of contribution.

https://github.com/Hyperledger-TWGC/fabric-rfcs/pull/5

[ ] @xiaohui249 ， please help verify with java SDK gateway solution as https://github.com/hyperledger/fabric-rfcs/pull/34#discussion_r742884764

[ ] CCS-go arm machine for CICD @davidkhala

some questions?

bccsp cert
unnecessary function
getValidityOptsForCert
hash option

msp impl for national crypto? @davidkhala
我们搞一个国密的msp实现是不是就完成了非tls部分的国密改造了？

name GM_wallet
motivation
in latest gateway sdk, we'd better have a GM wallet implementation. so that we can have a sample implementation for https://github.com/hyperledger/fabric-rfcs/pull/34#discussion_r742884764
languages: go, java, nodejs, typescript

前置条件
● sm2、sm3算法实现
● x509对sm2算法的支持
● tls对sm2_sm3算法支持
涉及部分
● 基于sm2、sm3实现bccsp接口，遗留问题：KeyImport()方法引入了x.509
● msp模块中也涉及到x.509的引用
● grpc tls通信
问题优先级
● 解决x.509的依赖问题（必要且紧急）
● grpc tls（必要）
解决方案
x.509依赖问题
通过接口定义对x.509进行抽象，优点：总体来说对fabric的侵入性不大，易于维护。缺点：代码臃肿，且从代码层次结构上而言，x.509标准作为密码学中公钥证书的唯一格式，对其进行抽象是极其不科学的方案。
grpc tls
侵入式修改grpc显然是不可能的，只能通过为grpc实现自定义的认证方式,做单向认证相对较为简单，因为sdk是可能获得到节点的tls证书，双向认证可能会存在一些问题。

repo: Hyperledger-TWGC/fabric-gm-wiki


text:
Staff role deleting submissions should be aware of the parameters

Description
When the staff user role deletes an application from the platform, they are not informed of the potential consequences of also deleting associated links, e.g., determinations and other applications on the platform. An application (concept note - 1st stage) is associated with determinations and oftentimes a proposal (2nd stage).
The applicant role is currently not given permission to delete any applications.
Solution
The staff user role see a warning or message informing them of the consequences of deleting an application associated with determinations and other proposals.
Priority
Low

Who can delete is controlled by permission set on user roles.

On April 6 standup we discussed:
Managing persmissions in the WagTail Admin:
WagTail Admin - go to settings/groups

Select a user role

Warning message for deleting an application

As I recall from our conversation, we should consider a message that includes information on the potential deletion of supporting documents and other dependencies. A user might delete an application but neglects to delete associated documents that could potentially lead to errors.

I am closing this issue and adding it to the Epic https://github.com/HyphaApp/hypha/issues/2814

authors: fourthletter frjo sandeepsajan0

repo: HyphaApp/hypha


text:
Make the table row consistent

Business contact table

Participant Requests table

Sharing Permission table

Team members table

@alex-yau-ttd  I took the change out of https://github.com/IABTechLab/uid2-self-serve-portal/pull/120
Regards to the table width, I found so far the width is not consistent. I will leave a comment ask for that

hmm the approvals error is still showing on two lines for me

authors: alex-yau-ttd jingyi-gao-ttd


text:
Error installing gem in MacOS M1

Installing tiktoken_ruby 0.0.8 with native extensions
Gem::Ext::BuildError: ERROR: Failed to build gem native extension.

    current directory: /usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby
/usr/local/bin/ruby -I /usr/local/lib/ruby/3.0.0 -r ./siteconf20240418-10855-35ug4t.rb extconf.rb
checking for gcc... yes
checking for g++... yes
checking for gcc-ar... yes
checking for cargo... no

current directory: /usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby
make DESTDIR\= clean

current directory: /usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby
make DESTDIR\=
info: downloading installer
info: profile set to 'minimal'
info: default host triple is aarch64-unknown-linux-gnu
info: skipping toolchain installation

Rust is installed now. Great!

To get started you need Cargo's bin directory
(/usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby/.rb-sys/stable/cargo/bin)
in your PATH
environment variable. This has not been done automatically.

To configure your current shell, you need to source
the corresponding env file under
/usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby/.rb-sys/stable/cargo.

This is usually done by running one of the following (note the leading DOT):
.
"/usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby/.rb-sys/stable/cargo/env"
# For sh/bash/zsh/ash/dash/pdksh
source
"/usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby/.rb-sys/stable/cargo/env.fish"
# For fish
info: syncing channel updates for 'stable-aarch64-unknown-linux-gnu'
info: latest update on 2024-04-09, rust version 1.77.2 (25ef9e3d8 2024-04-09)
info: downloading component 'cargo'
info: downloading component 'rust-std'
info: downloading component 'rustc'
info: installing component 'cargo'
info: installing component 'rust-std'
info: installing component 'rustc'

  stable-aarch64-unknown-linux-gnu installed - rustc 1.77.2 (25ef9e3d8 2024-04-09)

info: default toolchain set to 'stable-aarch64-unknown-linux-gnu'
info: checking for self-update
info: using existing install for 'stable-aarch64-unknown-linux-gnu'
info: default toolchain set to 'stable-aarch64-unknown-linux-gnu'

  stable-aarch64-unknown-linux-gnu unchanged - rustc 1.77.2 (25ef9e3d8 2024-04-09)

info: note that the toolchain 'stable-aarch64-unknown-linux-gnu' is currently in use (environment override by RUSTUP_TOOLCHAIN)
generating target/release/libtiktoken_ruby.so (release)
/usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby/.rb-sys/stable/cargo/bin/cargo rustc  --manifest-path ./Cargo.toml --target-dir target --lib --profile release -- -C linker=gcc -L native=/usr/local/lib -C link-arg=-lm
    Updating crates.io index
    Updating git repository `https://github.com/IAPark/tiktoken-rs.git`
    Updating git submodule `https://github.com/zurawiki/tiktoken`
 Downloading crates ...
  Downloaded aho-corasick v0.7.20
  Downloaded magnus-macros v0.6.0
  Downloaded shlex v1.1.0
  Downloaded autocfg v1.1.0
  Downloaded bit-set v0.5.3
  Downloaded either v1.10.0
  Downloaded cfg-if v1.0.0
  Downloaded glob v0.3.1
  Downloaded rb-sys-env v0.1.2
  Downloaded seq-macro v0.3.5
  Downloaded rustc-hash v1.1.0
  Downloaded scopeguard v1.1.0
  Downloaded once_cell v1.17.1
  Downloaded smallvec v1.10.0
  Downloaded quote v1.0.33
  Downloaded parking_lot_core v0.9.7
  Downloaded parking_lot v0.12.1
  Downloaded unicode-ident v1.0.8
  Downloaded serde v1.0.157
  Downloaded minimal-lexical v0.2.1
  Downloaded regex-automata v0.1.10
  Downloaded syn v2.0.31
  Downloaded bstr v1.4.0
  Downloaded libc v0.2.140
  Downloaded regex-syntax v0.6.28
  Downloaded regex v1.7.1
  Downloaded nom v7.1.3
  Downloaded magnus v0.6.1
  Downloaded itertools v0.12.1
  Downloaded bindgen v0.69.4
  Downloaded fancy-regex v0.11.0
  Downloaded base64 v0.21.0
  Downloaded proc-macro2 v1.0.66
  Downloaded memchr v2.5.0
  Downloaded lock_api v0.4.9
  Downloaded clang-sys v1.6.0
  Downloaded anyhow v1.0.70
  Downloaded shell-words v1.1.0
  Downloaded libloading v0.7.4
  Downloaded bitflags v2.4.0
  Downloaded rb-sys-build v0.9.87
  Downloaded cexpr v0.6.0
  Downloaded rb-sys v0.9.87
  Downloaded lazycell v1.3.0
  Downloaded lazy_static v1.4.0
  Downloaded bit-vec v0.6.3
   Compiling memchr v2.5.0
   Compiling proc-macro2 v1.0.66
   Compiling unicode-ident v1.0.8
   Compiling glob v0.3.1
   Compiling libc v0.2.140
   Compiling cfg-if v1.0.0
   Compiling minimal-lexical v0.2.1
   Compiling libloading v0.7.4
   Compiling clang-sys v1.6.0
   Compiling aho-corasick v0.7.20
   Compiling nom v7.1.3
   Compiling quote v1.0.33
   Compiling syn v2.0.31
   Compiling regex-syntax v0.6.28
   Compiling either v1.10.0
   Compiling bindgen v0.69.4
   Compiling itertools v0.12.1
   Compiling cexpr v0.6.0
   Compiling lazycell v1.3.0
   Compiling rustc-hash v1.1.0
   Compiling shlex v1.1.0
   Compiling regex v1.7.1
   Compiling bitflags v2.4.0
   Compiling lazy_static v1.4.0
   Compiling shell-words v1.1.0
   Compiling autocfg v1.1.0
   Compiling lock_api v0.4.9
   Compiling parking_lot_core v0.9.7
   Compiling anyhow v1.0.70
   Compiling scopeguard v1.1.0
   Compiling bit-vec v0.6.3
   Compiling smallvec v1.10.0
   Compiling rb-sys-env v0.1.2
   Compiling magnus v0.6.1
   Compiling bit-set v0.5.3
   Compiling regex-automata v0.1.10
   Compiling once_cell v1.17.1
   Compiling magnus-macros v0.6.0
   Compiling bstr v1.4.0
   Compiling rb-sys-build v0.9.87
   Compiling fancy-regex v0.11.0
   Compiling parking_lot v0.12.1
   Compiling base64 v0.21.0
   Compiling rb-sys v0.9.87
   Compiling seq-macro v0.3.5
   Compiling tiktoken-rs v0.3.2 (https://github.com/IAPark/tiktoken-rs.git#5231fbf4)
error: failed to run custom build command for `rb-sys v0.9.87`

Caused by:
  process didn't exit successfully: `/usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby/target/release/build/rb-sys-c65a4afa838c9b06/build-script-main` (exit status: 101)
  --- stdout
  cargo:rerun-if-env-changed=RUBY
  cargo:rerun-if-env-changed=RBCONFIG_CROSS_COMPILING
  cargo:rerun-if-env-changed=RBCONFIG_RUBY_PROGRAM_VERSION
  cargo:rerun-if-env-changed=RBCONFIG_platform
  cargo:rerun-if-env-changed=RBCONFIG_arch
  cargo:rerun-if-env-changed=RUBY_ROOT
  cargo:rerun-if-env-changed=RUBY_VERSION
  cargo:rerun-if-env-changed=RUBY
  cargo:rerun-if-changed=build/version.rs
  cargo:rerun-if-changed=build/features.rs
  cargo:rerun-if-changed=build/stable_api_config.rs
  cargo:rerun-if-changed=build/main.rs
  cargo:rerun-if-env-changed=RUBY_STATIC
  cargo:rerun-if-env-changed=RBCONFIG_ENABLE_SHARED
  cargo:rerun-if-env-changed=RBCONFIG_rubyhdrdir
  cargo:rerun-if-env-changed=RBCONFIG_rubyarchhdrdir
  cargo:rerun-if-env-changed=RBCONFIG_CPPFLAGS
  cargo:rerun-if-env-changed=RBCONFIG_rubyhdrdir
  cargo:rerun-if-env-changed=RBCONFIG_MAJOR
  cargo:rerun-if-env-changed=RBCONFIG_MINOR
  cargo:rerun-if-env-changed=TARGET
  cargo:rerun-if-env-changed=TARGET
  cargo:rerun-if-env-changed=BINDGEN_EXTRA_CLANG_ARGS_aarch64-unknown-linux-gnu
  cargo:rerun-if-env-changed=BINDGEN_EXTRA_CLANG_ARGS_aarch64-unknown-linux-gnu
  cargo:rerun-if-env-changed=BINDGEN_EXTRA_CLANG_ARGS_aarch64_unknown_linux_gnu
  cargo:rerun-if-env-changed=BINDGEN_EXTRA_CLANG_ARGS_aarch64_unknown_linux_gnu
  cargo:rerun-if-env-changed=BINDGEN_EXTRA_CLANG_ARGS
  cargo:rerun-if-env-changed=BINDGEN_EXTRA_CLANG_ARGS

  --- stderr
INFO: using bindgen with clang args: ["-I/usr/local/include/ruby-3.0.0", "-I/usr/local/include/ruby-3.0.0/aarch64-linux", "-fms-extensions", "-O3", "-ggdb3", "-Wall", "-Wextra", "-Wdeprecated-declarations", "-Wduplicated-cond", "-Wimplicit-function-declaration", "-Wimplicit-int",
"-Wmisleading-indentation", "-Wpointer-arith", "-Wwrite-strings", "-Wimplicit-fallthrough=0", "-Wmissing-noreturn", "-Wno-cast-function-type", "-Wno-constant-logical-operand", "-Wno-long-long", "-Wno-missing-field-initializers", "-Wno-overlength-strings", "-Wno-packed-bitfield-compat",
"-Wno-parentheses-equality", "-Wno-self-assign", "-Wno-tautological-compare", "-Wno-unused-parameter", "-Wno-unused-value", "-Wsuggest-attribute=format", "-Wsuggest-attribute=noreturn", "-Wunused-variable"]
  #include "ruby.h"

  #ifdef HAVE_RUBY_DEBUG_H
  #include "ruby/debug.h"
  #endif
  #ifdef HAVE_RUBY_DEFINES_H
  #include "ruby/defines.h"
  #endif
  #ifdef HAVE_RUBY_ENCODING_H
  #include "ruby/encoding.h"
  #endif
  #ifdef HAVE_RUBY_FIBER_SCHEDULER_H
  #include "ruby/fiber/scheduler.h"
  #endif
  #ifdef HAVE_RUBY_INTERN_H
  #include "ruby/intern.h"
  #endif
  #ifdef HAVE_RUBY_IO_H
  #include "ruby/io.h"
  #endif
  #ifdef HAVE_RUBY_MEMORY_VIEW_H
  #include "ruby/memory_view.h"
  #endif
  #ifdef HAVE_RUBY_MISSING_H
  #include "ruby/missing.h"
  #endif
  #ifdef HAVE_RUBY_ONIGMO_H
  #include "ruby/onigmo.h"
  #endif
  #ifdef HAVE_RUBY_ONIGURUMA_H
  #include "ruby/oniguruma.h"
  #endif
  #ifdef HAVE_RUBY_RACTOR_H
  #include "ruby/ractor.h"
  #endif
  #ifdef HAVE_RUBY_RANDOM_H
  #include "ruby/random.h"
  #endif
  #ifdef HAVE_RUBY_RE_H
  #include "ruby/re.h"
  #endif
  #ifdef HAVE_RUBY_REGEX_H
  #include "ruby/regex.h"
  #endif
  #ifdef HAVE_RUBY_RUBY_H
  #include "ruby/ruby.h"
  #endif
  #ifdef HAVE_RUBY_ST_H
  #include "ruby/st.h"
  #endif
  #ifdef HAVE_RUBY_THREAD_H
  #include "ruby/thread.h"
  #endif
  #ifdef HAVE_RUBY_THREAD_NATIVE_H
  #include "ruby/thread_native.h"
  #endif
  #ifdef HAVE_RUBY_UTIL_H
  #include "ruby/util.h"
  #endif
  #ifdef HAVE_RUBY_VERSION_H
  #include "ruby/version.h"
  #endif
  #ifdef HAVE_RUBY_VM_H
  #include "ruby/vm.h"
  #endif
  #ifdef HAVE_RUBY_WIN32_H
  #include "ruby/win32.h"
  #endif
  #ifdef HAVE_RUBY_IO_BUFFER_H
  #include "ruby/io/buffer.h"
  #endif
  #ifdef HAVE_RUBY_ATOMIC_H
  #include "ruby/atomic.h"
  #endif
  struct rb_sys__Opaque__RString { struct RString dummy; };
  struct rb_sys__Opaque__RArray { struct RArray dummy; };
  thread 'main' panicked at /usr/local/bundle/gems/tiktoken_ruby-0.0.8/ext/tiktoken_ruby/.rb-sys/stable/cargo/registry/src/index.crates.io-6f17d22bba15001f/bindgen-0.69.4/lib.rs:622:31:
  Unable to find libclang: "couldn't find any valid shared libraries matching: ['libclang.so', 'libclang-*.so', 'libclang.so.*', 'libclang-*.so.*'], set the `LIBCLANG_PATH` environment variable to a path where one of these files can be found (invalid: [])"
  note: run with `RUST_BACKTRACE=1` environment variable to display a backtrace
warning: build failed, waiting for other jobs to finish...
make: *** [Makefile:552: target/release/libtiktoken_ruby.so] Error 101

make failed, exit code 2

Gem files will remain installed in /usr/local/bundle/gems/tiktoken_ruby-0.0.8 for inspection.
Results logged to /usr/local/bundle/extensions/aarch64-linux/3.0.0/tiktoken_ruby-0.0.8/gem_make.out

  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:93:in `run'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:44:in `block in make'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:36:in `each'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:36:in `make'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/ext_conf_builder.rb:63:in `block in build'
  /usr/local/lib/ruby/3.0.0/tempfile.rb:317:in `open'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/ext_conf_builder.rb:26:in `build'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:159:in `build_extension'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:193:in `block in build_extensions'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:190:in `each'
  /usr/local/lib/ruby/3.0.0/rubygems/ext/builder.rb:190:in `build_extensions'
  /usr/local/lib/ruby/3.0.0/rubygems/installer.rb:837:in `build_extensions'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/rubygems_gem_installer.rb:76:in `build_extensions'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/rubygems_gem_installer.rb:28:in `install'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/source/rubygems.rb:205:in `install'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/installer/gem_installer.rb:54:in `install'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/installer/gem_installer.rb:16:in `install_from_spec'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/installer/parallel_installer.rb:132:in `do_install'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/installer/parallel_installer.rb:123:in `block in worker_pool'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/worker.rb:62:in `apply_func'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/worker.rb:57:in `block in process_queue'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/worker.rb:54:in `loop'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/worker.rb:54:in `process_queue'
  /usr/local/bundle/gems/bundler-2.5.7/lib/bundler/worker.rb:90:in `block (2 levels) in create_threads'

An error occurred while installing tiktoken_ruby (0.0.8), and Bundler cannot continue.

Hello, is this still an issue for you? I'm on an M1 as well and haven't had any installation problems.

Installing 0.0.8 and 0.0.9 on Ubuntu 20.04.6 LTS (Focal Fossa) Same issue

authors: AlessandroTolomio MarioRuiz gjtorikian


text:
No SleepAsAndroid device shows up in Blueprint

Hello, I have a very similar issue to the solved one here: https://github.com/IATkachenko/HA-SleepAsAndroid/discussions/41
I have read through that discussion and tried to mimic the solution, but no device shows up in the Sleep As Android blueprint, after restarting HA.

The Application Topic is: SleepAsAndroid/subtopic
The Integration MQTT Topic is: SleepAsAndroid/subtopic
Using the "Test" command in the application causes an event to pop up in the HA MQTT Integration when listening, and also in MQTT Explorer running on my desktop PC. And I've set an alarm on my Sleep As Android application to try to fire off a test event, which seems to work fine ("alarm_alert_start" "alarm_alert_dismiss" show up in MQTT Explorer).
I am doing something wrong but am not quite sure what it is. I am very new to this. Thank for you very much for your hard work!

@kevinnocom, hello.
Could you post integration logs at debug level while startup and any even from application?
To get debug logs you should add:
logger:
  default: warning
  logs:
    custom_components.sleep_as_android: debug

to configuration.yaml and restart Home Assistant.

@kevinnocom I just had the same problem, it was because I forgot to add /username resp. my device ID to the MQTT topic in Sleep: https://github.com/IATkachenko/HA-SleepAsAndroid#application-configuration
Maybe it is the same for you?

I see the messages in MQTT Explorer, but the integration fails to create the entity.
Home Assistant Core Logs:
2023-04-18 00:08:12.710 INFO (MainThread) [custom_components.sleep_as_android] Setting up 53bbe1409c513bbf36babe9c9b78726a
2023-04-18 00:08:12.714 WARNING (MainThread) [homeassistant.helpers.frame] Detected integration that uses deprecated `async_get_registry` to access entity registry, use async_get instead. Please report issue to the custom integration author for sleep_as_android using this method at custom_components/sleep_as_android/__init__.py, line 29: registry = await er.async_get_registry(hass)
2023-04-18 00:08:12.813 DEBUG (MainThread) [custom_components.sleep_as_android.sensor] async_setup_entry: adding configured entities is finished.
2023-04-18 00:08:12.813 DEBUG (MainThread) [custom_components.sleep_as_android.sensor] Going to subscribe to root topic.
2023-04-18 00:08:12.814 DEBUG (MainThread) [custom_components.sleep_as_android] Subscribing to 'SleepAsAndroid/+' (generated from 'SleepAsAndroid/%%%device%%%')
2023-04-18 00:08:12.824 ERROR (MainThread) [homeassistant.components.sensor] Error while setting up sleep_as_android platform for sensor
Traceback (most recent call last):
File "/usr/src/homeassistant/homeassistant/helpers/entity_platform.py", line 304, in _async_setup_platform
await asyncio.shield(task)
File "/config/custom_components/sleep_as_android/sensor.py", line 48, in async_setup_entry
await instance.subscribe_root_topic(async_add_entities)
File "/config/custom_components/sleep_as_android/__init__.py", line 183, in subscribe_root_topic
self._subscription_state = await subscription.async_subscribe_topics(
TypeError: async_subscribe_topics() takes 2 positional arguments but 3 were given

@Knysliux001, could you open an issue with this, with installation details (HA version, installation method etc)?
Looks like version incompatibility.

@IATkachenko could you please check the logs provided above?
Both 2023.4.4 and 2023.4.5 give identical Logs

I had this problem as well, and the solution was as @morgil mentioned:
I had the topic configured incorrectly (not matching between Sleep and the HASS integration). One had a leading slash, and the other did not - both seem to be valid, but they need to match up.
So I had:
devices/myphone/SleepAsAndroid
and
/devices/myphone/SleepAsAndroid
which of course do not actually match.
Setting them both to the same (as either of the above) works just fine as soon as Sleep sends a message (such as using the test button).
Might be nice to have some kind of validation for this or at least a mention in the documentation somewhere, even though it seems obvious in hindsight.

@cooljoebob64, hello
https://github.com/IATkachenko/HA-SleepAsAndroid/wiki/application-configuration
Topic is a topic name where the application will publish events. MUST be related to Topic template from integration settings.

May be I need reword it... Is any suggestions?

@kevinnocom I just had the same problem, it was because I forgot to add /username resp. my device ID to the MQTT topic in Sleep: https://github.com/IATkachenko/HA-SleepAsAndroid#application-configuration Maybe it is the same for you?

It is Important to make another test send over the sleep App to make the change visible in HA

c configured incorrectly (not matching between Sleep and the HASS integration). One had a leadi

Did you end up figuring this out as I am getting the same issue

authors: Gabriel-Graf IATkachenko Knysliux001 cooljoebob64 coreyjansen kevinnocom morgil

repo: IATkachenko/HA-SleepAsAndroid


text:
feat(Navbar-Icon) : made changes to add 'Cross' symbol to toggle the navbar OFF in mobile view

…
Related Issue
Closes: #596
Describe the changes you've made ✍
I have made the changes in the navbar toggler for the mobile view. I have added the react icons for the same and used the UseState hook to control the state of the navbar button.
Initially the navbar toggler button was not showing the close icon once opened, But now with the following code improvement the navbar shows a 'CLOSE' icon when the navbar is toggled 'ON'
Screenshots (if any) 📸

Heyy there! Is there anything else to be done by my side?

repo: IAmTamal/Milan


text:
Half screen problem in iBAX wallet.

Clear and concise description of the problem
When we want to send using the iBAX wallet on the phone, the screen appears halfway. It is necessary to turn the phone screen. This situation must be corrected. Thanks.
Suggested solution
The sending box can be fully displayed on the screen.
Alternative
No response
Additional context
No response
Validations

[X] Read the docs.
[X] Check that there isn't already an issue that request the same feature to avoid creating a duplicate.

Weaver is an IDE tool for developers and we are cooperate with JUTKEY team.
Please refer to this discussion: #629

authors: ibaxio madasretisireh

repo: IBAX-io/go-ibax


text:
[CLOSED] 8/15 migration

 Issue by Wilson-Ding1
Thursday Sep 28, 2017 at 04:27 GMT
Originally opened as https://github.ibm.com/IBM-Swift/Aphid/issues/11

 Issue by sandmman
Tuesday Aug 16, 2016 at 14:52 GMT
Originally opened as https://github.com/IBM-Swift/Aphid/pull/11

Removes extraneous guards for Data and updates travis.yml / package.swift.
Thanks, Jose!

sandmman included the following code: https://github.com/IBM-Swift/Aphid/pull/11/commits

 Comment by Wilson-Ding1
Thursday Sep 28, 2017 at 04:27 GMT

 Comment by rfdickerson
Tuesday Aug 16, 2016 at 15:17 GMT

Hi @jmarcelino . Thanks for the contribution, before we can merge your changes, we need you to complete this CLA form. I know it's a hassle, but the good thing is that once it's done you can contribute freely to all our projects.
https://github.com/IBM-Swift/CLA/blob/master/ibm-swift-cla-individual.pdf

 Comment by Wilson-Ding1
Thursday Sep 28, 2017 at 04:27 GMT

 Comment by jmarcelino
Tuesday Aug 16, 2016 at 16:26 GMT

Hi @rfdickerson no problem at all. I just filled in the CLA and emailed the copy to @kweinmeister as instructed. Thanks! Now need to to think of more/better changes :-)

repo: IBM-Swift-Sunset/Aphid


text:
Error when running via ssh on macOS

In SSLService.swift, the line
status = SecPKCS12Import(p12Data, options, &items)
will return status == 0 and items as an empty array if I ssh into a macOS system and exercise it there. If I log in via Screen Sharing an do the same exercise, it runs well.
I suspect this has to do with the keychain services not being available. I submitted a PR to make the error nicer (it resulted in an index-out-of-bounds before), but I don't know what to replace SecPKCS12Import with that doesn't require keychain services

Work-around is to call
security unlock-keychain
security list-keychain -s "jenkins-test"
before using SSLService.

I'll take a look. Thanks.

@niklassaers I'm encountering similar issue. It works if I run my code in Xcode but doesn't work if I run it from the shell, which is what I need. Can you tell me more about the keychain? Any information will help.
When I run it in Xcode, I get a popup to give access. Not sure how I can bypass this.
It do have several Keychain when I run security list-keychain, but it seems like I need something else.

authors: alexisoyama billabt niklassaers

repo: IBM-Swift/BlueSSLService


text:
Enable recovery from zero capacity

Description
Successor to #128
Allows the ConnectionPool to try to grow by one connection in the scenario where it is at zero capacity, and prevents threads from blocking (either indefinitely, or with a timeout) in the case where the database is unreachable.
Motivation and Context
When connectivity to a database is lost, the ConnectionPool logic introduced in #127 tries to ensure that dead connections are not returned to the user, and we throw that connection away and respond with a new one instead (which will rejoin the pool as normal when the user is finished).
However, if the database is down, the connection generator could fail, leaving the ConnectionPool with no option other than to return nil.  This shrinks the pool, as there are now one fewer connections than before, and eventually the pool will be at zero capacity (this is not the same as 'empty', because there is nothing in it: at zero capacity, not only is it empty, there are no 'good' connections currently on loan which will eventually return).
Once we hit zero capacity, the existing code has no way to grow the pool (since this was done during the 'take a connection from the pool' stage).
Other considerations
This PR does not introduce any new API to make it easier for a user to determine whether they should keep trying, or give up (ie. there is no isDatabaseReachable API).  This might be a useful addition in the future.
This PR also does not address the inconsistency between Postgres and MySQL where a Postgres connection is only flagged as disconnected once a query has failed to execute.  I added some thoughts on this subject to https://github.com/IBM-Swift/Swift-Kuery-PostgreSQL/pull/49.

Codecov Report

Merging #129 into master will decrease coverage by 0.59%.
The diff coverage is 0%.

@@           Coverage Diff            @@
##           master    #129     +/-   ##
========================================
- Coverage   85.19%   84.6%   -0.6%
========================================
  Files          43      43
  Lines        3579    3604     +25
========================================
  Hits         3049    3049
- Misses        530     555     +25

Flag
Coverage Δ

#SwiftKuery
84.6% <0%> (-0.6%)
:arrow_down:

Impacted Files
Coverage Δ

Sources/SwiftKuery/ConnectionPool.swift
0% <0%> (ø)
:arrow_up:

Continue to review full report at Codecov.

Legend - Click here to learn more
Δ = absolute <relative> (impact), ø = not affected, ? = missing data
Powered by Codecov. Last update c6c3c25...feb5f31. Read the comment docs.

repo: IBM-Swift/Swift-Kuery


text:
issue #1500 validate resources in bundles just once

Signed-off-by: Robin Arnold robin.arnold23@ibm.com

What about creating two signatures in the interface with a default implementation that passes true for a validateInput parameter (or false for a skipValidation parameter)? My preference is for a parameter that reflects the default use case for calling doCreate and doUpdate such as validateInput or performValidation instead of the negative skipValidation. Having two signatures for doCreate and doUpdate will allow implementers of the FHIROperation interface to call doCreate and doUpdate as they do today and automatically get the desired behavior (to validate the input).

Minor comment: what about creating two signatures in the interface with a default implementation that passes true for a validateInput parameter (or false for a skipValidation parameter)? My preference is for a parameter that reflects the default use case for calling doCreate and doUpdate such as validateInput or performValidation instead of the negative skipValidation. Having two signatures for doCreate and doUpdate will allow implementers of the FHIROperation interface to call doCreate and doUpdate as they do today and automatically get the desired behavior (to validate the input).

Hmm, I toiled with this too...but my brain settled on skipValidation=true because you're telling it you want it to do something other than the norm (special case used for bundles). Using something like doValidation, it could suggest that it's an optional thing. At least, that's how I thought about it last night.
I'll hold off merging until I take a look at the interface/default stuff you mentioned. I've switched branches at the moment and am mid-change in fhir-bucket.

authors: JohnTimm punktilious

repo: IBM/FHIR


text:
Simple Gradient Check to identify bad gradients in classification models

This pull request add the gradient_check() function to the abstract estimator class. Given a set of samples x and a set of labels y, the function will return a three boolean triple for each sample. Each value in the triple indicates if the loss gradient with respect to the sample is:

All zero
Contains NaN
Contains Inf

This change is intended to provide users easy access to check if the classifier has obfuscated gradients, which can break some whitebox attacks and result in users observing an artificially high adversarial robustness.
This function can also be used by the existing evasion attacks to check for bad gradients during the attack and issue a warning to the user rather than silently failing the attack and returning the original input sample. Doing so would require updating whitebox attack code during the generate call, which this pull request does not include.
Fixes #368
Type of change
Please check all relevant options.

[ ] Bug fix (non-breaking)
[X] New feature (non-breaking)
[ ] Breaking change (fix or feature that would cause existing functionality to not work as expected)
[ ] This change requires a documentation update

Testing
Simple local tests where 2 models were trained using the TFClassifier and then the new function was called against each model. One model had a normal gradient and one model had an obfuscated gradient (zero gradient due to activation saturation).
Checklist

[X] My code follows the style guidelines of this project
[X] I have performed a self-review of my own code
[X] I have commented my code
[ ] I have made corresponding changes to the documentation
[X] My changes generate no new warnings
[ ] I have added tests that prove my fix is effective or that my feature works
[ ] New and existing unit tests pass locally with my changes

I renamed the function as requested and put it in a separate file. I've moved the code to metrics/gradient_check.py as this code can be viewed as a method to quickly test if a classifier has an obfuscated gradient or not. I've also added a few tests to check that the function runs, and returns True when a bad gradient is present. The tests use a basic mnist model and manipulates the model weights so the gradient is 0 and NaN.

repo: IBM/adversarial-robustness-toolbox


text:
Add new layers: Conv1d and Conv3d

Description and motivation
As part of widening the scope of the library, it would be great to include more analog layers that can be used in different context and use cases. One of the likely first candidates would be additional convolution layers, taking advantage of the fact that we currently already have the AnalogConv2d layer implemented and that they would share quite some functionality.
Proposed solution
Using AnalogConv2d as a reference, implement other types of convolution layers. Note that torch actually uses a _ConvNd internal module as the basis for the convolution layers: it seems likely that the same approach would help us avoid some duplication and streamline the new layers.
Alternatives and other information

Thanks Fabio for adding these two layers! After #102 and #103, the new convolution layers are in place.

repo: IBM/aihwkit


text:
[Table] TableHeader missing padding from Carbon update

Describe the bug
When upgrading to Carbon styles were introduced that removed the padding from non sorting Table headers. We need to add back in to avoid layout issues.
To Reproduce
Steps to reproduce the behavior:

Go to https://carbon-addons-iot-react.com/?path=/story/watson-iot-table--stateful-example-with-expansion-and-column-resize
Open dev tools
examine table header that is not a sorted row
See the lack of padding on the th

Needed for TBI release in June

:tada: This issue has been resolved in version 2.76.2 :tada:
The release is available on:

npm package (@latest dist-tag)
GitHub release

Your semantic-release bot :package::rocket:

repo: IBM/carbon-addons-iot-react


text:
Accessibilty: all  and  elements need to be related via 'header' or 'scope' attributes

Describe in detail the issue you're having.

The header elements created from TableHeaderItem do not have 'header' or 'scope' attributes defined.

Is this a feature request (new component, new icon), a bug, or a general issue?

Accessibility defect

Is this issue related to a specific component?

ibm-table

What did you expect to happen? What happened instead? What would you like to see changed?

The TableHeaderItem constructor should accept a parameter for defining 'headers' attribute

What browser are you working in?

Chrome & Firefox

What version of the Carbon Design System are you using?

"carbon-components": "10.20.0"
"carbon-components-angular": "4.17.0"

I believe this has been done ... each cell has a headers attribute with a list of related headers. Since we programmatically generate ids for the headers I'm not sure it's reasonable to expose a headers property as part of the TableCell. See here for more on how we generate header ids.
I'm going to close this since it appears to be addressed already. If you have a specific other need please open an issue for that (and consider contributing some code!).

I believe this has been done ... each cell has a headers attribute with a list of related headers. Since we programmatically generate ids for the headers I'm not sure it's reasonable to expose a headers property as part of the TableCell. See here for more on how we generate header ids.
I'm going to close this since it appears to be addressed already. If you have a specific other need please open an issue for that (and consider contributing some code!).

authors: cal-smith ngalanmanlok

repo: IBM/carbon-components-angular


text:
Move all placeholder services into one shared service

dialog placeholder and modal placeholder do effectively the same thing ... they should be combined into a single service and component

Available from 2.0 with deprecation warnings for the old placeholders to be removed in 3.0

authors: cal-smith zvonimirfras